신경생물물리실험실

Publications

      Go to  http://scholar.google.co.kr/citations?user=DYdylb4AAAAJ&hl=en

  1. Stueland, M., Wang, T., Park, H. Y., & Mili, S. (2019). RDI Calculator: An Analysis Tool to Assess RNA Distributions in Cells. Scientific reports9(1), 8267.
  2. Kim, S. H., Vieira, M., Kim, H. J., Kesawat, M. S., & Park, H. Y. (2019). MS2 Labeling of Endogenous Beta-Actin mRNA Does Not Result in Stabilization of Degradation Intermediates. Molecules and cells42(4), 356.
  3. Choi, Y., Kim, D., Park, H. Y., Kim, K. W., Kim, M. Y., Park, C. K., & Lee, D. S. (2019). Graphene oxide-quenching-based fluorescence in situ hybridization (G-FISH) to detect RNA in tissue: Simple and fast tissue RNA diagnostics. Nanomedicine: Nanotechnology, Biology and Medicine, 16, 162-172.
  4. Shim, J. Y., Lee, B. H., & Park, H. Y. (2019). Visualization of Single mRNAs in Live Neurons. In Imaging Gene Expression (pp. 47-61). Humana, New York, NY.
  5. Kim, S. H., Vieira, M., Shim, J. Y., Choi, H., & Park, H. Y. (2018). Recent progress in single-molecule studies of mRNA localization in vivo. RNA biology.
  6. Das, S., Moon, H. C., Singer, R. H., & Park, H. Y. (2018). A transgenic mouse for imaging activity-dependent dynamics of endogenous Arc mRNA in live neurons. Science Advances4(6), eaar3448.
  7. Song, M. S., Moon, H. C., Jeon, J.-H., & Park, H. Y. (2018). Neuronal messenger ribonucleoprotein transport follows an aging Lévy walk. Nature Communications9, 344.
  8. Lee, B. H., & Park, H. Y. (2018). HybTrack: A hybrid single particle tracking software using manual and automatic detection of dim signals. Scientific Reports8, 212.
  9. Choi, Y. R., Kim, D., Park, H. Y., Kim, K. W., Kim, M. Y., Park, C. K., & Lee, D. S. (2017). Graphene Oxide-Quenching-Based Fluorescence In Situ Hybridization (G-FISH) To Detect RNA In Tissue: Simple And Fast Tissue RNA Diagnostics. bioRxiv, 143628.
  10. Lee, B. H., Bae, S. W., Shim, J. J., Park, S. Y., & Park, H. Y. (2016). Imaging Single-mRNA Localization and Translation in Live Neurons. Molecules and Cells, 39(12), 841.
  11. Vera, M., Biswas, J., Senecal, A., Singer, R. H., & Park, H. Y. (2016). Single Cell and Single-Molecule Analysis of Gene Expression Regulation. Annual Review of Genetics, 50(1).
  12. Moon, H. C., Lee, B. H., Lim, K., Son, J. S., Song, M. S., & Park, H. Y. (2016). Tracking single mRNA molecules in live cells. Journal of Physics D: Applied Physics, 49(23), 233001.
  13. Moon, H. C., & Park, H. Y. (2016). Chapter Two-Imaging Single mRNA Dynamics in Live Neurons and Brains. Methods in enzymology, 572, 51-64.
  14. Park, H. Y., & Song, M. (2016). Visualizing mRNA Dynamics in Live Neurons and Brain Tissues. Post-Transcriptional Gene Regulation, 325-334.
  15. Buxbaum, A. R., Yoon, Y. J., Singer, R. H., & Park, H. Y. (2015). Single-molecule insights into mRNA dynamics in neurons. Trends in cell biology, 25(8), 468-475.
  16. Monnier, N., Barry, Z., Park, H. Y, Su, K.-C., Katz, Z., English, B. P., Dey, A., Pan, K., Cheeseman, I. M., Singer, R. H., Bathe, M. (2015).Inferring Transient Particle Transport Dynamics in Live Cells. Nature Methods (published online).
  17. Barry, Z., Monnier, N., Park, H. Y., Su, K. C., Katz, Z., English, B. P., … & Bathe, M. (2015). Bayesian Classification of Mrna and Kinetochore Transport Dynamics. Biophysical Journal, 108(2), 164a-165a.
  18. Park, H. Y., Lim, H., Yoon, Y. J., Follenzi, A., Nwokafor, C., Lopez-Jones, M., Meng, X., and Singer, R. H. (2014). Visualization of Dynamics of Single Endogenous mRNA Labeled in Live Mouse. Science 343, 422.
  19. Katz, Z. B., Wells, A. L., Park, H. Y., Wu, B., Shenoy, S. M., and Singer, R. H. (2012). β-Actin mRNA Compartmentalization Enhances Focal Adhesion Stability and Directs Cell Migration. Genes & Development 26, 1885
  20. Park, H. Y., Trcek, T., Wells, A., Chao, J. A., and Singer, R. H. (2012). An Unbiased Analysis Method to Quantify mRNA Localization Reveals Its Correlation with Cell Motility. Cell Reports 1, 179.
  21. Trcek, T., Zenklusen, D., Chao, J. A., Larson, D. R., Park, H. Y., and Singer, R. H. (2012). Single mRNA Counting Using Fluorescent In Situ Hybridization in Budding Yeast. Nature Protocols 7, 408.
  22. Gu, W., Katz, Z., Wu, B., Park, H. Y., Li, D., Lin, S., Wells, A., and Singer, R. H. (2012). Regulation of Local Expression of Cell Adhesion and Motility-Related mRNAs in Breast Cancer Cells by IMP1/ZBP1. Journal of Cell Science 125, 81.
  23. Lionnet, T., Czaplinski, K., Darzacq, X., Shav-Tal, Y., Wells, A. L., Chao, J. A., Park, H. Y., de Turris, V., Lopez-Jones, M., and Singer, R. H. (2011). A Transgenic Mouse for In Vivo Detection of Endogenous Labeled mRNA. Nature Methods 8, 165.
  24. Lamb, J. S., Kwok, L. W., Qiu, X. Y., Andresen, K., Park, H. Y., and Pollack, L. (2008). Reconstructing Three-dimensional Shape Envelopes from Time-resolved Small-Angle X-ray Scattering Data. Journal of Applied Crystallography 41, 1046.
  25. Andresen, K., Qiu, X. Y., Pabit, S. A., Lamb, J. S., Park, H. Y., Kwok, L. W., and Pollack, L. (2008). Mono- and Trivalent Ions around DNA: A Small-Angle Scattering Study of Competition and Interactions. Biophysical Journal 95, 287.
  26. Schlatterer, J. C., Kwok, L. W., Lamb, J. S., Park, H. Y., Andresen, K., Brenowitz, M., and Pollack, L. (2008) Hinge Stiffness is a Barrier to RNA Folding. Journal of Molecular Biology 379, 859.
  27. Li, L., Pabit, S. A., Lamb, J. S., Park, H. Y., Pollack, L. (2008). Closing the Lid on DNA End-to-End Stacking Interactions. Applied Physics Letters 92, 223901.
  28. Park, H. Y., Kim, S. A., Korlach, J., Rhoades, E., Kwok, L. W., Zipfel, W. R., Waxham, M. N., Webb, W. W., and Pollack, L. (2008). Conformational Changes of Calmodulin upon Ca2+ binding studied with a Microfluidic Mixer. Proceedings of the National Academy of Sciences of the USA 105, 542.
  29. Qiu, X. Y., Andresen, K., Kwok, L. W., Lamb, J. S., Park, H. Y., and Pollack, L. (2007). Inter-DNA Attraction Mediated by Divalent Counterions. Physical Review Letters 99, 038104.
  30. Lamb, J. S., Cornaby, S., Andresen, K., Kwok, L. W., Park, H. Y., Qiu, X. Y., Smilgies, D. M., Bilderback, D. H., and Pollack, L. (2007). Focusing Capillary Optics for Use in Solution Small-Angle X-ray Scattering. Journal of Applied Crystallography 40, 193.
  31. Park, H. Y., Qiu, X. Y., Rhoades, E., Korlach, J., Kwok, L. W., Zipfel, W. R., Webb, W. W., and Pollack, L. (2006). Achieving Uniform Mixing in a Microfluidic Device: Hydrodynamic Focusing Prior to Mixing. Analytical Chemistry 78, 4465.
  32. Qiu, X. Y., Kwok, L. W., Park, H. Y., Lamb, J. S., Andresen, K., and Pollack, L. (2006). Measuring Inter-DNA Potentials in Solution. Physical Review Letters 96, 138101.
  33. Kwok, L. W., Shcherbakova, I., Lamb, J. S., Park, H. Y., Andresen, K., Smith, H., Brenowitz, M., and Pollack, L. (2006). Concordant Exploration of the Kinetics of RNA Folding from Global and Local Perspectives. Journal of Molecular Biology 355, 282.
  34. Andresen, K., Das, R., Park, H. Y., Smith, H., Kwok, L. W., Lamb, J. S., Kirkland, E. J., Herschlag, D., Finkelstein, K. D., and Pollack, L. (2004). Spatial Distribution of Competing Ions around DNA in Solution. Physical Review Letters 93, 248103.